Package: parmigene 1.1.1

Gabriele Sales

parmigene: Parallel Mutual Information Estimation for Gene Network Reconstruction

Parallel estimation of the mutual information based on entropy estimates from k-nearest neighbors distances and algorithms for the reconstruction of gene regulatory networks (Sales et al, 2011 <doi:10.1093/bioinformatics/btr274>).

Authors:Gabriele Sales [aut, cre], Chiara Romualdi [aut]

parmigene_1.1.1.tar.gz
parmigene_1.1.1.zip(r-4.7)parmigene_1.1.1.zip(r-4.6)parmigene_1.1.1.zip(r-4.5)
parmigene_1.1.1.tgz(r-4.6-x86_64)parmigene_1.1.1.tgz(r-4.6-arm64)parmigene_1.1.1.tgz(r-4.5-x86_64)parmigene_1.1.1.tgz(r-4.5-arm64)
parmigene_1.1.1.tar.gz(r-4.7-arm64)parmigene_1.1.1.tar.gz(r-4.7-x86_64)parmigene_1.1.1.tar.gz(r-4.6-arm64)parmigene_1.1.1.tar.gz(r-4.6-x86_64)
parmigene_1.1.1.tgz(r-4.6-emscripten)
manual.pdf |manual.html
card.svg |card.png
parmigene/json (API)

# Install 'parmigene' in R:
install.packages('parmigene', repos = c('https://sales-lab.r-universe.dev', 'https://cloud.r-project.org'))

Bug tracker:https://github.com/sales-lab/parmigene/issues

Uses libs:
  • openmp– GCC OpenMP (GOMP) support library

On CRAN:

Conda:

openmp

6.16 score 6 stars 4 packages 40 scripts 446 downloads 16 mentions 7 exports 0 dependencies

Last updated from:c9de9cc399. Checks:13 OK. Indexed: yes.

TargetResultTimeFilesSyslog
linux-devel-arm64OK143
linux-devel-x86_64OK97
source / vignettesOK153
linux-release-arm64OK98
linux-release-x86_64OK97
macos-release-arm64OK132
macos-release-x86_64OK403
macos-oldrel-arm64OK136
macos-oldrel-x86_64OK352
windows-develOK75
windows-releaseOK77
windows-oldrelOK87
wasm-releaseOK87

Exports:aracne.aaracne.mclrknnmiknnmi.allknnmi.crossmrnet

Dependencies: