Package: parmigene 1.1.1

Gabriele Sales

parmigene: Parallel Mutual Information Estimation for Gene Network Reconstruction

Parallel estimation of the mutual information based on entropy estimates from k-nearest neighbors distances and algorithms for the reconstruction of gene regulatory networks (Sales et al, 2011 <doi:10.1093/bioinformatics/btr274>).

Authors:Gabriele Sales [aut, cre], Chiara Romualdi [aut]

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parmigene.pdf |parmigene.html
parmigene/json (API)

# Install 'parmigene' in R:
install.packages('parmigene', repos = c('https://sales-lab.r-universe.dev', 'https://cloud.r-project.org'))

Peer review:

Bug tracker:https://github.com/sales-lab/parmigene/issues

Uses libs:
  • openmp– GCC OpenMP (GOMP) support library

On CRAN:

6.02 score 5 stars 4 packages 35 scripts 916 downloads 16 mentions 7 exports 0 dependencies

Last updated 1 months agofrom:c9de9cc399. Checks:OK: 9. Indexed: yes.

TargetResultDate
Doc / VignettesOKNov 20 2024
R-4.5-win-x86_64OKNov 20 2024
R-4.5-linux-x86_64OKNov 20 2024
R-4.4-win-x86_64OKNov 20 2024
R-4.4-mac-x86_64OKNov 20 2024
R-4.4-mac-aarch64OKNov 20 2024
R-4.3-win-x86_64OKNov 20 2024
R-4.3-mac-x86_64OKNov 20 2024
R-4.3-mac-aarch64OKNov 20 2024

Exports:aracne.aaracne.mclrknnmiknnmi.allknnmi.crossmrnet

Dependencies: